1.13.11.39: biphenyl-2,3-diol 1,2-dioxygenase

This is an abbreviated version!
For detailed information about biphenyl-2,3-diol 1,2-dioxygenase, go to the full flat file.

Reaction

Synonyms

2'-aminobiphenyl-2,3-diol 1,2-dioxygenase, 2,3-DBDO, 2,3-DBPD, 2,3-DHBD, 2,3-DHBP dioxygenase, 2,3-dihydroxy-biphenyl 1,2-dioxygenase, 2,3-dihydroxybiphenyl 1,2-dioxygenase, 2,3-dihydroxybiphenyl dioxygenase, 2,3-dihydroxybiphenyl-1,2-dioxygenase, 2,3-dihydroxybiphenyl:oxygen 1,2 oxidoreductase, 2,3-diOH-biphenyl 1,2-dioxygenase, 2,3DHBD, 2-aminobiphenyl-2,3-diol-1,2-dioxygenase, 23 OHBP oxygenase, 3-phenylcatechol dioxygenase, biphenyl-2,3-diol dioxygenase, BPDO, BphC, BphC1, BphC1-BN6, BphC2, BphC2-BN6, BphC3, bphC5, BphCLA-4, BphC_JF8, BphC_LA-4, C23o, CarB, CarBaBb, DHB12O, DHBD, EtbC, manganese(II)-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase, RrbphCI

ECTree

     1 Oxidoreductases

         1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)

             1.13.11 With incorporation of two atoms of oxygen

                1.13.11.39 biphenyl-2,3-diol 1,2-dioxygenase

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Results	in table
758	AA Sequence
7	Application
1	CAS Registry Number
53	Cloned(Commentary)
7	Crystallization (Commentary)
8	Expression
28	General Information
1	General Stability
74	Inhibitors
21	kcat/KM [mM/s]
9	Ki Value [mM]
97	KM Value [mM]
41	Metals/Ions
34	Molecular Weight [Da]
112	Natural Substrates/ Products (Substrates)
465	Organism
5	Oxidation Stability
8	Pathway
20	PDB ID
17	pH Optimum
7	pH Range
3	pH Stability
1	pI Value
9	Protein Variants
22	Purification (Commentary)
1	Reaction
4	Reaction Type
162	Reference
1	Renatured (Commentary)
26	Specific Activity [micromol/min/mg]
3	Storage Stability
466	Substrates and Products (Substrate)
55	Subunits
140	Synonyms
1	Systematic Name
18	Temperature Optimum [°C]
4	Temperature Range [°C]
15	Temperature Stability [°C]
61	Turnover Number [1/s]

Organism

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Organism on EC 1.13.11.39 - biphenyl-2,3-diol 1,2-dioxygenase

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ORGANISM

COMMENTARY

LITERATURE

UNIPROT

SEQUENCE DB

SOURCE

Achromobacter piechaudii

strain isolated from soils exposed to heat transfer fluid of thermo-solar plants or from rhizospheric soils of plants growing near a thermo-solar plant

765474

-

-

brenda

Achromobacter sp.

3 entries

Achromobacter sp. BP3

3 entries

Acinetobacter sp.

-

439414

-

-

brenda

Bacillus sp. (in: Bacteria)

3 entries

Bacillus sp. (in: Bacteria) JF8

3 entries

Burkholderia cepacia

2 entries

Burkholderia cepacia LB400

-

285295, 439415, 439420

-

-

brenda

Burkholderia sp.

LB400

658964

-

-

brenda

Burkholderia sp. LB400

LB400

658964

-

-

brenda

Comamonas sp.

SMN4

659689

-

-

brenda

Comamonas sp. SMN4

SMN4

659689

-

-

brenda

Comamonas testosteroni

2 entries

Cupriavidus necator

-

439414

-

-

brenda

Dehalobacter sp.

-

764680

-

-

brenda

Dehalococcoides sp.

-

764680

-

-

brenda

Dehalogenimonas sp.

-

764680

-

-

brenda

Delftia acidovorans

-

742643

Q8KRD4

UniProt

brenda

Delftia acidovorans SMN4

-

742643

Q8KRD4

UniProt

brenda

Dyella ginsengisoli

3 entries

Dyella ginsengisoli LA-4

3 entries

Mycobacterium tuberculosis variant bovis

-

676058

-

-

brenda

Paraburkholderia xenovorans

-

674342, 742574

-

-

brenda

Pseudomonas aeruginosa

2 entries

Pseudomonas cruciviae

-

439402

-

-

brenda

Pseudomonas oleovorans

3 entries

Pseudomonas oleovorans KF707

-

439403, 439409, 439412, 439413, 439418, 659087

-

-

brenda

Pseudomonas oleovorans KF714

-

439413

-

-

brenda

Pseudomonas plecoglossicida

strain isolated from soils exposed to heat transfer fluid of thermo-solar plants or from rhizospheric soils of plants growing near a thermo-solar plant

765474

-

-

brenda

Pseudomonas putida

7 entries

Pseudomonas putida KF715

-

439406, 439409, 439412, 439413

-

-

brenda

Pseudomonas putida KT 2442

-

439418, 439420

-

-

brenda

Pseudomonas putida OU83

-

439404, 439409, 439413

Q52032

SwissProt

brenda

Pseudomonas putida PpG7

-

439413

-

-

brenda

Pseudomonas resinovorans

-

721861

-

-

brenda

Pseudomonas resinovorans CA10

-

721861

-

-

brenda

Pseudomonas sp.

-

439407, 439409, 439410, 439411, 439412, 439413, 439415, 439416, 671719

-

-

brenda

Pseudomonas sp. CB406

-

439411

-

-

brenda

Pseudomonas sp. DJ-12

-

439409

-

-

brenda

Pseudomonas sp. DJ77

-

439416

-

-

brenda

Pseudomonas sp. HA10

-

764859

-

-

brenda

Pseudomonas sp. IC

-

439413

-

-

brenda

Pseudomonas sp. KKS102

-

765269

P17297

UniProt

brenda

Pseudomonas sp. SA-6

-

703475

-

-

brenda

Pseudomonas stutzeri

ATCC 31258

672955

-

-

brenda

Ralstonia sp.

-

674226

-

-

brenda

Ralstonia sp. SA-4

-

703475

-

-

brenda

Ralstonia sp. SBUG 290

-

674226

-

-

brenda

Rhodococcus erythropolis

-

439412

-

-

brenda

Rhodococcus erythropolis TA421

-

439412

-

-

brenda

Rhodococcus globerulus

2 entries

Rhodococcus globerulus P6

-

285295, 439408, 439409, 439410, 439412, 439416, 439417, 659021

-

-

brenda

Rhodococcus pyridinivorans

2 entries

Rhodococcus pyridinivorans R04

2 entries

Rhodococcus rhodochrous

-

712995

-

-

brenda

Rhodococcus sp.

2 entries

Rhodococcus sp. RHA1

-

439412, 439413

Q53126

SwissProt

brenda

Rhodococcus wratislaviensis

strain isolated from groundwater contaminated with nitrophenolics and trichloroethylene

765829

-

-

brenda

Sphingobium yanoikuyae

3 entries

Sphingobium yanoikuyae Q1

-

439416

-

-

brenda

Sphingomonas sp.

-

439417

-

-

brenda

Sphingomonas sp. BN6

-

439417

-

-

brenda

uncultured bacterium

activated sludge metagenome, gene bphC_meta

724640

F2X5L9

UniProt

brenda

Achromobacter sp.

BphC1; isolated from petroleum-contaminated soil, gene bphC1

725631

B3VTK1

UniProt

brenda

Achromobacter sp.

BphC2; isolated from petroleum-contaminated soil, gene bphC2

725631

B3VTL5

UniProt

brenda

Achromobacter sp.

isolated from petroleum-contaminated soil, gene bphC3

725631

-

-

brenda

Achromobacter sp. BP3

BphC1; isolated from petroleum-contaminated soil, gene bphC1

725631

B3VTK1

UniProt

brenda

Achromobacter sp. BP3

BphC2; isolated from petroleum-contaminated soil, gene bphC2

725631

B3VTL5

UniProt

brenda

Achromobacter sp. BP3

isolated from petroleum-contaminated soil, gene bphC3

725631

-

-

brenda

Bacillus sp. (in: Bacteria)

-

710751

-

-

brenda

Bacillus sp. (in: Bacteria)

gene BsbphCI

724188

Q8GR45

SwissProt

brenda

Bacillus sp. (in: Bacteria)

JF8

659212

Q8GR45

SwissProt

brenda

Bacillus sp. (in: Bacteria) JF8

-

710751

-

-

brenda

Bacillus sp. (in: Bacteria) JF8

gene BsbphCI

724188

Q8GR45

SwissProt

brenda

Bacillus sp. (in: Bacteria) JF8

JF8

659212

Q8GR45

SwissProt

brenda

Burkholderia cepacia

-

285295, 439415, 439420

-

-

brenda

Burkholderia cepacia

organism reclassified, prior refered as Pseudomonas sp. strain LB400 or Pseudomonas cepacia strain LB400

439407, 439409, 439411, 439412, 439413, 439416

-

-

brenda

Comamonas testosteroni

-

439413, 439414, 439418

-

-

brenda

Comamonas testosteroni

formerly Pseudomonas testosteroni strain B-356

439405, 439411

-

-

brenda

Dyella ginsengisoli

-

723977, 743118

-

-

brenda

Dyella ginsengisoli

gene bphC

724567

-

-

brenda

Dyella ginsengisoli

LA-4

703749

A9QT35

UniProt

brenda

Dyella ginsengisoli LA-4

-

723977, 743118

-

-

brenda

Dyella ginsengisoli LA-4

gene bphC

724567

-

-

brenda

Dyella ginsengisoli LA-4

LA-4

703749

A9QT35

UniProt

brenda

Pseudomonas aeruginosa

-

439404, 439410, 439411, 439412, 439413, 439414

-

-

brenda

Pseudomonas aeruginosa

strain isolated from soils exposed to heat transfer fluid of thermo-solar plants or from rhizospheric soils of plants growing near a thermo-solar plant

765474

-

-

brenda

Pseudomonas oleovorans

-

439403, 439404, 439409, 439410, 439411, 439412, 439413, 439414, 439418, 659087

-

-

brenda

Pseudomonas oleovorans

native enzyme and expressed in Pseudomonas aeruginosa

661976

-

-

brenda

Pseudomonas oleovorans

strain isolated from soils exposed to heat transfer fluid of thermo-solar plants or from rhizospheric soils of plants growing near a thermo-solar plant

765474

-

-

brenda

Pseudomonas putida

-

439402

-

-

brenda

Pseudomonas putida

-

439404

Q52032

SwissProt

brenda

Pseudomonas putida

-

439406, 439408, 439409

-

-

brenda

Pseudomonas putida

-

439409

Q52032

SwissProt

brenda

Pseudomonas putida

-

439411, 439412, 439413

-

-

brenda

Pseudomonas putida

-

439413, 439414

Q52032

SwissProt

brenda

Pseudomonas putida

-

439418, 439420

-

-

brenda

Rhodococcus globerulus

-

285295, 439408, 439409, 439410, 439412, 439416, 439417, 659021

-

-

brenda

Rhodococcus globerulus

formerly Acinetobacter sp. strain P6

439407

-

-

brenda

Rhodococcus pyridinivorans

-

685422

Q6QF56

SwissProt

brenda

Rhodococcus pyridinivorans

fragment

685422

Q6QF57

SwissProt

brenda

Rhodococcus pyridinivorans R04

-

685422

Q6QF56

SwissProt

brenda

Rhodococcus pyridinivorans R04

fragment

685422

Q6QF57

SwissProt

brenda

Rhodococcus sp.

-

439412, 439413

Q53126

SwissProt

brenda

Rhodococcus sp.

strain RDC1 derived from strain RHA1, bphC gene mutant

439412

-

-

brenda

Sphingobium yanoikuyae

-

439416

-

-

brenda

Sphingobium yanoikuyae

formerly Pseudomonas paucimobilis strain Q1

439410, 439411, 439412, 439413, 439414

-

-

brenda

Sphingobium yanoikuyae

strain B1, formerly Beijerincka sp. wild-type strain B1

439410, 439413

-

-

brenda