Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
vanillate + O2 + NADH + H+ | Microbacterium sp. RG1 | - |
3,4-dihydroxybenzoate + NAD+ + H2O + formaldehyde | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Microbacterium sp. RG1 | - |
- |
- |
Source Tissue | Comment | Organism | Textmining |
---|---|---|---|
cell culture | the cells grow in vanillate, 4-hydroxybenzoate, syringate, ferulate, p-coumarate, and 3-O-methylgallate, but not on vanillin and syringaldehyde. Maximum specific growth rates, uptake rates and yields on lignin model compounds by Microbacterium sp. RG1, overview. When strain is cultivated with 5 mM each of the aldehydes vanillin or syringaldehyde no growth is observed for more than 200 h | Microbacterium sp. RG1 | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
vanillate + O2 + NADH + H+ | - |
Microbacterium sp. RG1 | 3,4-dihydroxybenzoate + NAD+ + H2O + formaldehyde | - |
? |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
NADH | - |
Microbacterium sp. RG1 |
General Information | Comment | Organism |
---|---|---|
metabolism | softwood lignin is a polymer composed of mainly guaiacyl (G) units, and thus the most reported aromatic compounds generated from pretreatment of softwood-based lignin are guaiacyl-derivates such as vanillin and guaiacol. Hardwood lignin, on the other hand, contains both guaiacyl (G) and syringyl (S) units and its depolymerization results, apart from the guaiacyl-derivates, in S-derivates such as syringaldehyde, syringate and syringol. Yet, only a few organisms are reported to metabolize compounds from syringyl-based (S) lignin. Microbacterium sp. RG1 can grow on syringate and vanillate | Microbacterium sp. RG1 |