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Literature summary for 1.14.12.18 extracted from

  • Zhao, Q.; Bilal, M.; Yue, S.; Hu, H.; Wang, W.; Zhang, X.
    Identification of biphenyl 2, 3-dioxygenase and its catabolic role for phenazine degradation in Sphingobium yanoikuyae B1 (2017), J. Environ. Manag., 204, 494-501 .
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli DH5alpha cells Sphingobium yanoikuyae

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
biphenyl + NADH + H+ + O2 Sphingobium yanoikuyae
-
(1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+
-
?
biphenyl + NADH + H+ + O2 Sphingobium yanoikuyae B1
-
(1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+
-
?

Organism

Organism UniProt Comment Textmining
Sphingobium yanoikuyae
-
-
-
Sphingobium yanoikuyae B1
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
biphenyl + NADH + H+ + O2
-
Sphingobium yanoikuyae (1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+
-
?
biphenyl + NADH + H+ + O2
-
Sphingobium yanoikuyae B1 (1S,2R)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+
-
?
phenazine + NADH + H+ + O2
-
Sphingobium yanoikuyae 1,2-dihydro-1,2-dihydroxyphenazine + NAD+
-
?
phenazine + NADH + H+ + O2
-
Sphingobium yanoikuyae B1 1,2-dihydro-1,2-dihydroxyphenazine + NAD+
-
?

Synonyms

Synonyms Comment Organism
biphenyl 2, 3-dioxygenase
-
Sphingobium yanoikuyae
ThebphA1fA2f
-
Sphingobium yanoikuyae

Cofactor

Cofactor Comment Organism Structure
NADH
-
Sphingobium yanoikuyae