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Literature summary for 1.1.1.8 extracted from

  • Zhao, Y.; Li, X.; Wang, F.; Zhao, X.; Gao, Y.; Zhao, C.; He, L.; Li, Z.; Xu, J.
    Glycerol-3-phosphate dehydrogenase (GPDH) gene family in Zea mays L. Identification, subcellular localization, and transcriptional responses to abiotic stresses (2018), PLoS ONE, 13, e0200357 .
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

Crystallization (Comment) Organism
homology modeling of structure Zea mays

Localization

Localization Comment Organism GeneOntology No. Textmining
chloroplast
-
Zea mays 9507
-
cytoplasm
-
Zea mays 5737
-
cytosol
-
Zea mays 5829
-
cytosol the enzyme is located to the cytosol and mainly recruited to the surface of endoplasmic reticulum Zea mays 5829
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
dihydroxyacetone phosphate + NADH + H+ Zea mays
-
NAD+ + sn-glycerol 3-phosphate
-
?

Organism

Organism UniProt Comment Textmining
Zea mays
-
-
-
Zea mays A0A1D6HW80 isoform GPDH5
-
Zea mays A0A345VNI9
-
-
Zea mays B4FA85
-
-
Zea mays B4FA85 isoform GPDH3
-
Zea mays B4FVR2
-
-
Zea mays B4FZV9
-
-
Zea mays B4FZV9 isoform GPDH4
-

Source Tissue

Source Tissue Comment Organism Textmining
anther
-
Zea mays
-
corn silk
-
Zea mays
-
corn silk high transcription level Zea mays
-
leaf
-
Zea mays
-
leaf high transcription level Zea mays
-
leaf sheath
-
Zea mays
-
additional information transcripts of GPDH1 are detected in all examined tissues, with a high transcriptional level in silk, root and leaf Zea mays
-
pollen
-
Zea mays
-
root high transcription level Zea mays
-
root high level of transcripts accumulation Zea mays
-
seed high level of transcripts accumulation in roots and early stage developing seeds Zea mays
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
dihydroxyacetone phosphate + NADH + H+
-
Zea mays NAD+ + sn-glycerol 3-phosphate
-
?

Subunits

Subunits Comment Organism
? x * 51000, calculated from sequence Zea mays
? x * 40300, calculated from sequence Zea mays
? x * 45700, calculated from sequence Zea mays
? x * 51400, calculated from sequence Zea mays

Synonyms

Synonyms Comment Organism
100383152
-
Zea mays
glycerol-3-phosphate dehydrogenase
-
Zea mays
GPDH
-
Zea mays
GPDH1
-
Zea mays
GPDH2
-
Zea mays
GPDH3
-
Zea mays
GPDH4
-
Zea mays
GPDH5
-
Zea mays
GRMZM2G090747_T01 gene ID Zea mays
GRMZM2G155348_T01 gene ID Zea mays
GRMZM2G173195_T01 gene ID Zea mays
GRMZM6G161711_T01 gene ID Zea mays
ZEAMMB73_Zm00001d010670
-
Zea mays
ZEAMMB73_Zm00001d041962
-
Zea mays
ZEAMMB73_Zm00001d042152
-
Zea mays
ZmGPDH1
-
Zea mays
ZmGPDH3
-
Zea mays
ZmGPDH4
-
Zea mays
ZmGPDH5
-
Zea mays

Cofactor

Cofactor Comment Organism Structure
NAD+ sequence contains a N-terminal NAD+-binding domain and a C-terminal NAD+-dependent GPD domain Zea mays

pI Value

Organism Comment pI Value Maximum pI Value
Zea mays calculated from sequence
-
5.5
Zea mays calculated from sequence
-
6.8
Zea mays calculated from sequence
-
7.3
Zea mays calculated from sequence
-
8.4

Expression

Organism Comment Expression
Zea mays expression is upregulated at the early stage of salt treatment up
Zea mays significant induction under osmotic stresses. Remarkably up-regulated after 3 h of salt treatrment up
Zea mays significant induction under osmotic stresses. Up-regulated at the early stage of salt treatment. Initially induced after 1 h, maintaining relatively high transcripts level during the treatment up

General Information

General Information Comment Organism
physiological function the enzyme plays an essential role in glycerolipid metabolism and in response to various stresses in different species Zea mays